Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
WM42_0185 | WM42_0187 | WM42_0185 | WM42_0187 | Sulfite exporter TauE/SafE family protein. | RNA methyltransferase, RsmD family. | 0.830 |
WM42_0185 | WM42_0188 | WM42_0185 | WM42_0188 | Sulfite exporter TauE/SafE family protein. | Biotin-requiring enzyme family protein. | 0.830 |
WM42_0185 | WM42_0189 | WM42_0185 | WM42_0189 | Sulfite exporter TauE/SafE family protein. | Helicase domain protein. | 0.827 |
WM42_0185 | WM42_0190 | WM42_0185 | WM42_0190 | Sulfite exporter TauE/SafE family protein. | DAK2 domain protein. | 0.826 |
WM42_0185 | WM42_0193 | WM42_0185 | WM42_0193 | Sulfite exporter TauE/SafE family protein. | Hypothetical protein. | 0.542 |
WM42_0185 | coaD | WM42_0185 | WM42_0186 | Sulfite exporter TauE/SafE family protein. | Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.833 |
WM42_0185 | thiL | WM42_0185 | WM42_0192 | Sulfite exporter TauE/SafE family protein. | Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.603 |
WM42_0185 | ung | WM42_0185 | WM42_0191 | Sulfite exporter TauE/SafE family protein. | uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.634 |
WM42_0187 | WM42_0185 | WM42_0187 | WM42_0185 | RNA methyltransferase, RsmD family. | Sulfite exporter TauE/SafE family protein. | 0.830 |
WM42_0187 | WM42_0188 | WM42_0187 | WM42_0188 | RNA methyltransferase, RsmD family. | Biotin-requiring enzyme family protein. | 0.859 |
WM42_0187 | WM42_0189 | WM42_0187 | WM42_0189 | RNA methyltransferase, RsmD family. | Helicase domain protein. | 0.830 |
WM42_0187 | WM42_0190 | WM42_0187 | WM42_0190 | RNA methyltransferase, RsmD family. | DAK2 domain protein. | 0.854 |
WM42_0187 | WM42_0193 | WM42_0187 | WM42_0193 | RNA methyltransferase, RsmD family. | Hypothetical protein. | 0.543 |
WM42_0187 | coaD | WM42_0187 | WM42_0186 | RNA methyltransferase, RsmD family. | Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.960 |
WM42_0187 | thiL | WM42_0187 | WM42_0192 | RNA methyltransferase, RsmD family. | Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.604 |
WM42_0187 | ung | WM42_0187 | WM42_0191 | RNA methyltransferase, RsmD family. | uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.673 |
WM42_0188 | WM42_0185 | WM42_0188 | WM42_0185 | Biotin-requiring enzyme family protein. | Sulfite exporter TauE/SafE family protein. | 0.830 |
WM42_0188 | WM42_0187 | WM42_0188 | WM42_0187 | Biotin-requiring enzyme family protein. | RNA methyltransferase, RsmD family. | 0.859 |
WM42_0188 | WM42_0189 | WM42_0188 | WM42_0189 | Biotin-requiring enzyme family protein. | Helicase domain protein. | 0.830 |
WM42_0188 | WM42_0190 | WM42_0188 | WM42_0190 | Biotin-requiring enzyme family protein. | DAK2 domain protein. | 0.830 |
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