Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
WM42_0496 | WM42_0497 | WM42_0496 | WM42_0497 | Esterase of the alpha-beta hydrolase superfamily domain protein. | Hypothetical protein. | 0.773 |
WM42_0496 | WM42_0498 | WM42_0496 | WM42_0498 | Esterase of the alpha-beta hydrolase superfamily domain protein. | Hypothetical protein. | 0.550 |
WM42_0496 | WM42_0499 | WM42_0496 | WM42_0499 | Esterase of the alpha-beta hydrolase superfamily domain protein. | Bacterial transferase hexapeptide family protein. | 0.550 |
WM42_0497 | WM42_0496 | WM42_0497 | WM42_0496 | Hypothetical protein. | Esterase of the alpha-beta hydrolase superfamily domain protein. | 0.773 |
WM42_0497 | WM42_0498 | WM42_0497 | WM42_0498 | Hypothetical protein. | Hypothetical protein. | 0.630 |
WM42_0497 | WM42_0499 | WM42_0497 | WM42_0499 | Hypothetical protein. | Bacterial transferase hexapeptide family protein. | 0.690 |
WM42_0498 | WM42_0496 | WM42_0498 | WM42_0496 | Hypothetical protein. | Esterase of the alpha-beta hydrolase superfamily domain protein. | 0.550 |
WM42_0498 | WM42_0497 | WM42_0498 | WM42_0497 | Hypothetical protein. | Hypothetical protein. | 0.630 |
WM42_0498 | WM42_0499 | WM42_0498 | WM42_0499 | Hypothetical protein. | Bacterial transferase hexapeptide family protein. | 0.833 |
WM42_0499 | WM42_0496 | WM42_0499 | WM42_0496 | Bacterial transferase hexapeptide family protein. | Esterase of the alpha-beta hydrolase superfamily domain protein. | 0.550 |
WM42_0499 | WM42_0497 | WM42_0499 | WM42_0497 | Bacterial transferase hexapeptide family protein. | Hypothetical protein. | 0.690 |
WM42_0499 | WM42_0498 | WM42_0499 | WM42_0498 | Bacterial transferase hexapeptide family protein. | Hypothetical protein. | 0.833 |
WM42_0499 | amn | WM42_0499 | WM42_1296 | Bacterial transferase hexapeptide family protein. | AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations. | 0.411 |
WM42_0499 | cynT | WM42_0499 | WM42_1778 | Bacterial transferase hexapeptide family protein. | Carbonic anhydrase. | 0.948 |
amn | WM42_0499 | WM42_1296 | WM42_0499 | AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations. | Bacterial transferase hexapeptide family protein. | 0.411 |
cynT | WM42_0499 | WM42_1778 | WM42_0499 | Carbonic anhydrase. | Bacterial transferase hexapeptide family protein. | 0.948 |