STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WM42_0716Hypothetical protein. (223 aa)    
Predicted Functional Partners:
dltA
D-alanine--poly(phosphoribitol) ligase, subunit 1.
  
 
 0.817
WM42_2619
doxX family protein.
  
    0.747
WM42_0254
Hypothetical protein.
  
    0.713
WM42_1644
Alpha/beta hydrolase family protein.
  
 0.650
WM42_0465
Septum formation initiator family protein.
  
     0.649
WM42_1245
thiS family protein.
  
     0.586
WM42_2314
RelA/SpoT domain protein.
  
     0.560
WM42_0715
Cell envelope-related function transcriptional attenuator common domain protein.
       0.547
WM42_0258
Hypothetical protein.
  
     0.527
WM42_0517
Hypothetical protein.
  
     0.523
Your Current Organism:
Corynebacterium simulans
NCBI taxonomy Id: 146827
Other names: ATCC BAA-15, C. simulans, CCUG 43305, CIP 106488, Corynebacterium simulans Wattiau et al. 2000, Corynebacterium sp. UCL301, Corynebacterium sp. UCL553, Corynebacterium sp. UCL557, DSM 44415, JCM 12107, UCL 553, strain Co 553
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.