Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
WM42_0529 | WM42_0673 | Putative conserved transmembrane protein. | Hypothetical protein. | 0.768 |
WM42_0529 | WM42_0677 | Putative conserved transmembrane protein. | Putative secreted protein. | 0.773 |
WM42_0529 | WM42_0826 | Putative conserved transmembrane protein. | Hypothetical protein. | 0.772 |
WM42_0529 | WM42_0904 | Putative conserved transmembrane protein. | Alpha/beta hydrolase fold family protein. | 0.771 |
WM42_0529 | WM42_1013 | Putative conserved transmembrane protein. | Putative transmembrane protein. | 0.771 |
WM42_0529 | WM42_1621 | Putative conserved transmembrane protein. | Septum formation family protein. | 0.768 |
WM42_0529 | WM42_1703 | Putative conserved transmembrane protein. | Hypothetical protein. | 0.771 |
WM42_0529 | WM42_1922 | Putative conserved transmembrane protein. | Putative lipoprotein. | 0.767 |
WM42_0529 | WM42_1941 | Putative conserved transmembrane protein. | Hypothetical protein. | 0.780 |
WM42_0529 | WM42_1961 | Putative conserved transmembrane protein. | Hypothetical protein. | 0.752 |
WM42_0673 | WM42_0529 | Hypothetical protein. | Putative conserved transmembrane protein. | 0.768 |
WM42_0673 | WM42_0677 | Hypothetical protein. | Putative secreted protein. | 0.905 |
WM42_0673 | WM42_0826 | Hypothetical protein. | Hypothetical protein. | 0.772 |
WM42_0673 | WM42_0904 | Hypothetical protein. | Alpha/beta hydrolase fold family protein. | 0.774 |
WM42_0673 | WM42_1013 | Hypothetical protein. | Putative transmembrane protein. | 0.774 |
WM42_0673 | WM42_1621 | Hypothetical protein. | Septum formation family protein. | 0.783 |
WM42_0673 | WM42_1703 | Hypothetical protein. | Hypothetical protein. | 0.772 |
WM42_0673 | WM42_1922 | Hypothetical protein. | Putative lipoprotein. | 0.774 |
WM42_0673 | WM42_1941 | Hypothetical protein. | Hypothetical protein. | 0.768 |
WM42_0673 | WM42_1961 | Hypothetical protein. | Hypothetical protein. | 0.773 |
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