STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WM42_1171ABC transporter family protein. (520 aa)    
Predicted Functional Partners:
WM42_1168
Cobalt transport family protein.
 
     0.843
WM42_1167
Conserved hypothetical integral membrane TIGR02185 family protein.
 
     0.804
WM42_1812
Conserved hypothetical integral membrane TIGR02185 family protein.
  
     0.692
WM42_1811
Cobalt transport family protein.
 
     0.685
WM42_1072
ABC transporter family protein.
  
  0.625
WM42_1383
ABC transporter family protein.
  
     0.615
WM42_1169
Heme ABC exporter, ATP-binding protein CcmA.
    
0.607
WM42_1170
ABC transporter family protein.
 
    
0.596
WM42_1816
Amino acid adenylation domain protein.
 
  
 0.566
dltA
D-alanine--poly(phosphoribitol) ligase, subunit 1.
 
 
 0.553
Your Current Organism:
Corynebacterium simulans
NCBI taxonomy Id: 146827
Other names: ATCC BAA-15, C. simulans, CCUG 43305, CIP 106488, Corynebacterium simulans Wattiau et al. 2000, Corynebacterium sp. UCL301, Corynebacterium sp. UCL553, Corynebacterium sp. UCL557, DSM 44415, JCM 12107, UCL 553, strain Co 553
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.