STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WM42_2518Sugar (and other) transporter family protein. (496 aa)    
Predicted Functional Partners:
WM42_2517
Inosine-uridine preferring nucleoside hydrolase.
 
  
 0.880
rbsK-2
pfkB carbohydrate kinase family protein; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
  
 0.775
WM42_2520
Putative LACI-FAMILY TRANSCRIPTIONAL REGULATOR.
     
 0.724
WM42_0958
Major Facilitator Superfamily protein.
  
   
 0.483
WM42_1080
Beta-ketoacyl synthase, C-terminal domain protein.
 
  
 0.440
WM42_1770
H+ antiporter-2 family protein; Belongs to the major facilitator superfamily.
  
   
 0.417
Your Current Organism:
Corynebacterium simulans
NCBI taxonomy Id: 146827
Other names: ATCC BAA-15, C. simulans, CCUG 43305, CIP 106488, Corynebacterium simulans Wattiau et al. 2000, Corynebacterium sp. UCL301, Corynebacterium sp. UCL553, Corynebacterium sp. UCL557, DSM 44415, JCM 12107, UCL 553, strain Co 553
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.