Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
WM42_0664 | WM42_2618 | WM42_0664 | WM42_2618 | Lon protease (S16) C-terminal proteolytic domain protein. | uvrD/REP helicase N-terminal domain protein. | 0.502 |
WM42_2617 | WM42_2618 | WM42_2617 | WM42_2618 | Hypothetical protein. | uvrD/REP helicase N-terminal domain protein. | 0.830 |
WM42_2617 | WM42_2619 | WM42_2617 | WM42_2619 | Hypothetical protein. | doxX family protein. | 0.736 |
WM42_2617 | WM42_2620 | WM42_2617 | WM42_2620 | Hypothetical protein. | Metallo-beta-lactamase superfamily protein. | 0.426 |
WM42_2618 | WM42_0664 | WM42_2618 | WM42_0664 | uvrD/REP helicase N-terminal domain protein. | Lon protease (S16) C-terminal proteolytic domain protein. | 0.502 |
WM42_2618 | WM42_2617 | WM42_2618 | WM42_2617 | uvrD/REP helicase N-terminal domain protein. | Hypothetical protein. | 0.830 |
WM42_2618 | WM42_2619 | WM42_2618 | WM42_2619 | uvrD/REP helicase N-terminal domain protein. | doxX family protein. | 0.687 |
WM42_2618 | WM42_2620 | WM42_2618 | WM42_2620 | uvrD/REP helicase N-terminal domain protein. | Metallo-beta-lactamase superfamily protein. | 0.573 |
WM42_2618 | rpoA | WM42_2618 | WM42_0921 | uvrD/REP helicase N-terminal domain protein. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.792 |
WM42_2618 | rpoB | WM42_2618 | WM42_0991 | uvrD/REP helicase N-terminal domain protein. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.977 |
WM42_2618 | rpoC | WM42_2618 | WM42_0990 | uvrD/REP helicase N-terminal domain protein. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.974 |
WM42_2618 | rpoZ | WM42_2618 | WM42_0170 | uvrD/REP helicase N-terminal domain protein. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.826 |
WM42_2618 | uvrA | WM42_2618 | WM42_2621 | uvrD/REP helicase N-terminal domain protein. | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.556 |
WM42_2618 | whiB | WM42_2618 | WM42_0679 | uvrD/REP helicase N-terminal domain protein. | Transcription factor WhiB family protein; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.463 |
WM42_2619 | WM42_2617 | WM42_2619 | WM42_2617 | doxX family protein. | Hypothetical protein. | 0.736 |
WM42_2619 | WM42_2618 | WM42_2619 | WM42_2618 | doxX family protein. | uvrD/REP helicase N-terminal domain protein. | 0.687 |
WM42_2619 | WM42_2620 | WM42_2619 | WM42_2620 | doxX family protein. | Metallo-beta-lactamase superfamily protein. | 0.699 |
WM42_2619 | uvrA | WM42_2619 | WM42_2621 | doxX family protein. | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.571 |
WM42_2620 | WM42_2617 | WM42_2620 | WM42_2617 | Metallo-beta-lactamase superfamily protein. | Hypothetical protein. | 0.426 |
WM42_2620 | WM42_2618 | WM42_2620 | WM42_2618 | Metallo-beta-lactamase superfamily protein. | uvrD/REP helicase N-terminal domain protein. | 0.573 |
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