STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABM69364.1Possible high light inducible protein. (91 aa)    
Predicted Functional Partners:
ABM69365.1
ABC transporter, ATP binding protein; COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only].
       0.823
nrdJ
Ribonucleotide reductase (Class II).
  
     0.760
ABM69866.1
Phage integrase family.
  
     0.756
ABM69874.1
Conserved hypothetical protein; Catalyzes the decarbonylation of fatty aldehydes to alkanes.
  
     0.754
ABM70914.1
Conserved hypothetical protein.
  
     0.752
ABM70091.1
Conserved hypothetical protein.
  
     0.726
ABM69875.1
COG5322 Predicted dehydrogenase [General function prediction only].
  
     0.700
ABM71060.1
COG2109 ATP:corrinoid adenosyltransferase [Coenzyme metabolism].
  
     0.688
ABM69775.1
Conserved hypothetical protein.
  
     0.683
ABM70197.1
Conserved hypothetical protein.
  
     0.648
Your Current Organism:
Prochlorococcus marinus AS9601
NCBI taxonomy Id: 146891
Other names: P. marinus str. AS9601, Prochlorococcus marinus str. AS9601, Prochlorococcus sp. AS9601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.