STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LI90_105Monooxygenase FAD-binding protein. (322 aa)    
Predicted Functional Partners:
LI90_107
Uncharacterized protein.
     0.984
LI90_978
Electron transfer protein FdxB.
  
 
 0.815
LI90_1883
Cytochrome P450.
   
 0.722
LI90_1598
FAD dependent oxidoreductase.
  
 
 0.720
LI90_1881
VioB-polyketide synthase.
 
  
 0.659
kynU
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
  
 
 0.654
LI90_581
Oxidoreductase FAD-binding domain protein.
   
 
 0.643
LI90_595
Oxidoreductase FAD/NAD(P)-binding domain protein.
   
 
 0.643
LI90_2756
Ferredoxin.
     
 0.620
LI90_821
Ferredoxin.
     
 0.620
Your Current Organism:
Streptomyces thermoautotrophicus
NCBI taxonomy Id: 1469144
Other names: DSM 41605, LMG 19855, LMG:19855, NBRC 101056, S. thermoautotrophicus, strain UBT1
Server load: low (6%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.