STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LI90_3096TAP domain protein. (533 aa)    
Predicted Functional Partners:
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
  0.696
LI90_4016
Phosphopantetheine-binding protein.
    
  0.696
LI90_1381
CinA-like protein; Belongs to the CinA family.
    
  0.654
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.645
LI90_2502
2-Amino-2-deoxy-isochorismate synthase.
    
 0.537
LI90_2684
2-Amino-2-deoxy-isochorismate synthase.
    
 0.537
LI90_1167
Hypothetical protein.
     
 0.528
nucS
Hypothetical protein; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family.
  
     0.428
LI90_1940
Hypothetical protein.
  
 
  0.418
LI90_2895
Malonyl CoA-acyl carrier protein transacylase.
   
 
 0.416
Your Current Organism:
Streptomyces thermoautotrophicus
NCBI taxonomy Id: 1469144
Other names: DSM 41605, LMG 19855, LMG:19855, NBRC 101056, S. thermoautotrophicus, strain UBT1
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