Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LI90_212 | LI90_3098 | LI90_212 | LI90_3098 | DNA polymerase I. | Single-stranded DNA-binding protein. | 0.437 |
LI90_212 | LI90_3313 | LI90_212 | LI90_3313 | DNA polymerase I. | Hypothetical protein. | 0.808 |
LI90_212 | LI90_3808 | LI90_212 | LI90_3808 | DNA polymerase I. | Single-stranded DNA-binding protein. | 0.437 |
LI90_212 | LI90_39 | LI90_212 | LI90_39 | DNA polymerase I. | Single-stranded DNA-binding protein. | 0.437 |
LI90_212 | LI90_4119 | LI90_212 | LI90_4119 | DNA polymerase I. | NUDIX hydrolase. | 0.427 |
LI90_212 | polA | LI90_212 | LI90_1519 | DNA polymerase I. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.947 |
LI90_212 | rnhB | LI90_212 | LI90_1311 | DNA polymerase I. | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.701 |
LI90_3098 | LI90_212 | LI90_3098 | LI90_212 | Single-stranded DNA-binding protein. | DNA polymerase I. | 0.437 |
LI90_3098 | LI90_3313 | LI90_3098 | LI90_3313 | Single-stranded DNA-binding protein. | Hypothetical protein. | 0.844 |
LI90_3098 | LI90_3808 | LI90_3098 | LI90_3808 | Single-stranded DNA-binding protein. | Single-stranded DNA-binding protein. | 0.811 |
LI90_3098 | LI90_39 | LI90_3098 | LI90_39 | Single-stranded DNA-binding protein. | Single-stranded DNA-binding protein. | 0.911 |
LI90_3098 | polA | LI90_3098 | LI90_1519 | Single-stranded DNA-binding protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.437 |
LI90_3313 | LI90_212 | LI90_3313 | LI90_212 | Hypothetical protein. | DNA polymerase I. | 0.808 |
LI90_3313 | LI90_3098 | LI90_3313 | LI90_3098 | Hypothetical protein. | Single-stranded DNA-binding protein. | 0.844 |
LI90_3313 | LI90_3314 | LI90_3313 | LI90_3314 | Hypothetical protein. | Putative acetyltransferase. | 0.559 |
LI90_3313 | LI90_3808 | LI90_3313 | LI90_3808 | Hypothetical protein. | Single-stranded DNA-binding protein. | 0.844 |
LI90_3313 | LI90_3829 | LI90_3313 | LI90_3829 | Hypothetical protein. | 2-oxoglutarate oxidoreductase; Alpha subunit. | 0.739 |
LI90_3313 | LI90_39 | LI90_3313 | LI90_39 | Hypothetical protein. | Single-stranded DNA-binding protein. | 0.844 |
LI90_3313 | LI90_4119 | LI90_3313 | LI90_4119 | Hypothetical protein. | NUDIX hydrolase. | 0.690 |
LI90_3313 | cobT | LI90_3313 | LI90_2550 | Hypothetical protein. | Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). | 0.680 |
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