STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LI90_393Adenylate cyclase. (180 aa)    
Predicted Functional Partners:
LI90_392
Hypothetical protein.
  
  0.984
LI90_3464
Adenylate cyclase.
     
 0.908
LI90_2782
Adenylate cyclase.
  
  
  0.826
LI90_3486
Adenylyl cyclase CyaB.
  
  
  0.820
LI90_4009
Transcriptional regulator; XRE family.
  
     0.588
LI90_2129
Helicase domain protein.
  
     0.526
LI90_394
Putative transcriptional regulator.
 
     0.509
LI90_2270
Hypothetical protein.
  
     0.504
LI90_4003
Hypothetical protein.
  
     0.499
LI90_2130
Hypothetical protein.
  
     0.496
Your Current Organism:
Streptomyces thermoautotrophicus
NCBI taxonomy Id: 1469144
Other names: DSM 41605, LMG 19855, LMG:19855, NBRC 101056, S. thermoautotrophicus, strain UBT1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.