Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
LI90_2697 | LI90_3351 | Uncharacterized protein. | Acyltransferase; WS/DGAT/MGAT; Belongs to the long-chain O-acyltransferase family. | 0.585 |
LI90_2697 | LI90_341 | Uncharacterized protein. | Arsenical pump-driving ATPase. | 0.688 |
LI90_2697 | LI90_342 | Uncharacterized protein. | Arsenical pump-driving ATPase. | 0.694 |
LI90_2697 | LI90_3689 | Uncharacterized protein. | Alpha/beta hydrolase fold containing protein. | 0.637 |
LI90_2697 | LI90_4078 | Uncharacterized protein. | Hypothetical protein. | 0.745 |
LI90_2697 | LI90_4094 | Uncharacterized protein. | Helix-turn-helix domain protein. | 0.759 |
LI90_2697 | LI90_567 | Uncharacterized protein. | UDP-glucose 4-epimerase. | 0.690 |
LI90_2697 | LI90_568 | Uncharacterized protein. | Phospholipid/glycerol acyltransferase. | 0.748 |
LI90_2697 | LI90_973 | Uncharacterized protein. | Uncharacterized protein. | 0.774 |
LI90_3351 | LI90_2697 | Acyltransferase; WS/DGAT/MGAT; Belongs to the long-chain O-acyltransferase family. | Uncharacterized protein. | 0.585 |
LI90_3351 | LI90_341 | Acyltransferase; WS/DGAT/MGAT; Belongs to the long-chain O-acyltransferase family. | Arsenical pump-driving ATPase. | 0.564 |
LI90_3351 | LI90_342 | Acyltransferase; WS/DGAT/MGAT; Belongs to the long-chain O-acyltransferase family. | Arsenical pump-driving ATPase. | 0.450 |
LI90_3351 | LI90_4094 | Acyltransferase; WS/DGAT/MGAT; Belongs to the long-chain O-acyltransferase family. | Helix-turn-helix domain protein. | 0.597 |
LI90_3351 | LI90_567 | Acyltransferase; WS/DGAT/MGAT; Belongs to the long-chain O-acyltransferase family. | UDP-glucose 4-epimerase. | 0.733 |
LI90_3351 | LI90_568 | Acyltransferase; WS/DGAT/MGAT; Belongs to the long-chain O-acyltransferase family. | Phospholipid/glycerol acyltransferase. | 0.721 |
LI90_3351 | LI90_973 | Acyltransferase; WS/DGAT/MGAT; Belongs to the long-chain O-acyltransferase family. | Uncharacterized protein. | 0.426 |
LI90_341 | LI90_2697 | Arsenical pump-driving ATPase. | Uncharacterized protein. | 0.688 |
LI90_341 | LI90_3351 | Arsenical pump-driving ATPase. | Acyltransferase; WS/DGAT/MGAT; Belongs to the long-chain O-acyltransferase family. | 0.564 |
LI90_341 | LI90_342 | Arsenical pump-driving ATPase. | Arsenical pump-driving ATPase. | 0.969 |
LI90_341 | LI90_3689 | Arsenical pump-driving ATPase. | Alpha/beta hydrolase fold containing protein. | 0.416 |
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