Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
LI90_1587 | LI90_413 | Silent information regulator protein Sir2. | Transcriptional regulator; GntR family. | 0.606 |
LI90_1587 | LI90_4195 | Silent information regulator protein Sir2. | Sulfurtransferase. | 0.856 |
LI90_1587 | LI90_467 | Silent information regulator protein Sir2. | Nicotinamide-nucleotide adenylyltransferase; NadR family. | 0.993 |
LI90_1587 | LI90_469 | Silent information regulator protein Sir2. | Nicotinamide-nucleotide adenylyltransferase; NadR family. | 0.984 |
LI90_2957 | LI90_3294 | Ferric uptake regulator; Fur family; Belongs to the Fur family. | Uncharacterized protein; Belongs to the UPF0301 (AlgH) family. | 0.727 |
LI90_2957 | LI90_413 | Ferric uptake regulator; Fur family; Belongs to the Fur family. | Transcriptional regulator; GntR family. | 0.717 |
LI90_2957 | LI90_467 | Ferric uptake regulator; Fur family; Belongs to the Fur family. | Nicotinamide-nucleotide adenylyltransferase; NadR family. | 0.548 |
LI90_2957 | LI90_469 | Ferric uptake regulator; Fur family; Belongs to the Fur family. | Nicotinamide-nucleotide adenylyltransferase; NadR family. | 0.548 |
LI90_3294 | LI90_2957 | Uncharacterized protein; Belongs to the UPF0301 (AlgH) family. | Ferric uptake regulator; Fur family; Belongs to the Fur family. | 0.727 |
LI90_3294 | LI90_413 | Uncharacterized protein; Belongs to the UPF0301 (AlgH) family. | Transcriptional regulator; GntR family. | 0.799 |
LI90_3294 | LI90_4195 | Uncharacterized protein; Belongs to the UPF0301 (AlgH) family. | Sulfurtransferase. | 0.770 |
LI90_3294 | LI90_467 | Uncharacterized protein; Belongs to the UPF0301 (AlgH) family. | Nicotinamide-nucleotide adenylyltransferase; NadR family. | 0.879 |
LI90_3294 | LI90_469 | Uncharacterized protein; Belongs to the UPF0301 (AlgH) family. | Nicotinamide-nucleotide adenylyltransferase; NadR family. | 0.879 |
LI90_413 | LI90_1587 | Transcriptional regulator; GntR family. | Silent information regulator protein Sir2. | 0.606 |
LI90_413 | LI90_2957 | Transcriptional regulator; GntR family. | Ferric uptake regulator; Fur family; Belongs to the Fur family. | 0.717 |
LI90_413 | LI90_3294 | Transcriptional regulator; GntR family. | Uncharacterized protein; Belongs to the UPF0301 (AlgH) family. | 0.799 |
LI90_413 | LI90_414 | Transcriptional regulator; GntR family. | Hypothetical protein. | 0.817 |
LI90_413 | LI90_4195 | Transcriptional regulator; GntR family. | Sulfurtransferase. | 0.572 |
LI90_413 | LI90_467 | Transcriptional regulator; GntR family. | Nicotinamide-nucleotide adenylyltransferase; NadR family. | 0.869 |
LI90_413 | LI90_469 | Transcriptional regulator; GntR family. | Nicotinamide-nucleotide adenylyltransferase; NadR family. | 0.869 |
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