STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSO99972.1Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (155 aa)    
Predicted Functional Partners:
OSP03556.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.949
OSP02693.1
Methylaspartate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.933
OSP06955.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.917
OSP03787.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.917
OSO99368.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.891
OSP01489.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.891
OSO99936.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.881
OSP00541.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.868
OSP02429.1
Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.868
rpsC
30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
    
 0.865
Your Current Organism:
Streptomyces griseofuscus
NCBI taxonomy Id: 146922
Other names: ATCC 23916, BCRC 10483, CBS 837.68, CCRC 10483, CCRC:10483, CECT 3307, DSM 40191, IFO 12870, IMET 42068, ISP 5191, JCM 4276, JCM 4641, KACC 20083, NBRC 12870, NCIMB 9821, NRRL B-5429, NRRL-ISP 5191, S. griseofuscus, Streptomyces griseifuscus
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