STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANJ07680.1Galactose oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (645 aa)    
Predicted Functional Partners:
ANJ07679.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.982
ANJ11365.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.657
ANJ09234.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.623
ANJ08082.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.585
ANJ10118.1
Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.548
pulA
Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.531
ANJ05766.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.523
ANJ08110.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.482
ANJ08286.1
Asparagine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.472
ANJ05588.1
Diacylglycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.459
Your Current Organism:
Streptomyces parvulus
NCBI taxonomy Id: 146923
Other names: ATCC 12434, ATCC 19796, BCRC 12046, CBS 418.59, CBS 548.68, CCRC 12046, CCRC:12046, DSM 40048, HUT 6081, ICMP 156, IFO 13193, IMET 41380, ISP 5048, JCM 4068, JCM 4601, LMG 19312, LMG:19312, NBRC 13193, NCIMB 11240, NRRL-ISP 5048, RIA 507, S. parvulus, Streptomyces parvullus, Streptomyces sp. RL01, Streptomyces sp. USC012, Streptomyces sp. USC013, UNIQEM 182
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