STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000583135_02562Unannotated protein. (472 aa)    
Predicted Functional Partners:
GCA_000583135_02137
Unannotated protein.
  
 0.995
GCA_000583135_00246
Unannotated protein.
 
    0.668
GCA_000583135_02563
Unannotated protein.
   
   0.652
GCA_000583135_02138
Unannotated protein.
 
 
 0.625
GCA_000583135_00097
Unannotated protein.
 
   
 0.572
GCA_000583135_02831
Unannotated protein.
   
    0.563
GCA_000583135_02564
Unannotated protein.
       0.536
GCA_000583135_01167
Unannotated protein.
  
  
 0.528
GCA_000583135_00260
Unannotated protein.
 
   
 0.519
GCA_000583135_02111
Unannotated protein.
 
  
 0.518
Your Current Organism:
Thioalkalivibrio sp. HK1
NCBI taxonomy Id: 1469245
Other names: T. sp. HK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.