STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E1O_2826020S proteasome subunits A and B. (260 aa)    
Predicted Functional Partners:
E1O_28290
Putative uncharacterized protein.
 
    0.802
E1O_28300
Protein containing domains DUF404, DUF407.
 
  
 0.789
E1O_28270
Transglutaminase-like protein.
 
    0.731
E1O_28280
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
       0.603
E1O_28250
Methyltransferase domain protein.
       0.451
Your Current Organism:
Burkholderiales bacterium GJE10
NCBI taxonomy Id: 1469502
Other names: B. bacterium GJ-E10, Burkholderiales bacterium GJ-E10
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