STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000797445_03339Unannotated protein. (373 aa)    
Predicted Functional Partners:
GCA_000797445_03176
Unannotated protein.
 
  
 0.986
GCA_000797445_01195
Unannotated protein.
 
 
 0.984
GCA_000797445_01199
Unannotated protein.
 
 
 0.984
GCA_000797445_01197
Unannotated protein.
 
 
 0.979
GCA_000797445_02007
Unannotated protein.
 
  
 0.958
GCA_000797445_03308
Unannotated protein.
 
 
 0.931
GCA_000797445_00398
Unannotated protein.
 
   
 0.873
GCA_000797445_01198
Unannotated protein.
 
  
 0.856
GCA_000797445_02944
Unannotated protein.
  
 
 0.842
GCA_000797445_02627
Unannotated protein.
 
   
 0.841
Your Current Organism:
Lacinutrix jangbogonensis
NCBI taxonomy Id: 1469557
Other names: JCM 19883, KCTC 32573, L. jangbogonensis, Lacinutrix jangbogonensis Lee et al. 2015, Lacinutrix sp. PAMC 27137, strain PAMC 27137
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.