STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDD76_11244Unannotated protein; Belongs to the NifD/NifK/NifE/NifN family. (491 aa)    
Predicted Functional Partners:
EDD76_11243
Unannotated protein.
 
0.996
nifH
Unannotated protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 0.996
EDD76_103208
Unannotated protein.
 
0.987
EDD76_11242
Unannotated protein.
 
  
 0.960
EDD76_11241
Unannotated protein.
 
  
 0.959
EDD76_11239
Unannotated protein.
 
     0.836
EDD76_103203
Unannotated protein.
 
  
 0.825
EDD76_10225
Unannotated protein; Belongs to the glutamine synthetase family.
   
 
 0.817
hcp
Unannotated protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
     
 0.800
EDD76_11246
Unannotated protein.
 
    0.764
Your Current Organism:
Kineothrix alysoides
NCBI taxonomy Id: 1469948
Other names: ATCC TSD-26, Clostridium sp. KNHs209, DSM 100556, K. alysoides, Kineothrix alysoides Haas and Blanchard 2017, Lachnospiraceae bacterium KNHs209, strain KNHs209
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.