STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDD76_11313Unannotated protein. (740 aa)    
Predicted Functional Partners:
EDD76_11312
Unannotated protein.
       0.773
EDD76_105174
Unannotated protein.
  
  
  0.726
EDD76_103107
Unannotated protein.
  
     0.688
EDD76_105115
Unannotated protein.
  
     0.672
EDD76_104201
Unannotated protein.
  
     0.653
EDD76_104192
Unannotated protein.
  
     0.646
EDD76_104124
Unannotated protein.
  
     0.640
EDD76_104132
Unannotated protein.
  
  
  0.637
EDD76_104269
Unannotated protein.
  
     0.609
EDD76_10349
Unannotated protein.
 
    0.607
Your Current Organism:
Kineothrix alysoides
NCBI taxonomy Id: 1469948
Other names: ATCC TSD-26, Clostridium sp. KNHs209, DSM 100556, K. alysoides, Kineothrix alysoides Haas and Blanchard 2017, Lachnospiraceae bacterium KNHs209, strain KNHs209
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.