STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDD76_11123Unannotated protein; Belongs to the CDS family. (275 aa)    
Predicted Functional Partners:
EDD76_11124
Unannotated protein; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
  
 0.991
EDD76_12163
Unannotated protein.
 
  
 0.968
EDD76_10652
Unannotated protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.945
EDD76_101206
Unannotated protein; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
 
  
 0.942
dxr
Unannotated protein; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.
  
  
 0.931
EDD76_11745
Unannotated protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.929
EDD76_110179
Unannotated protein.
    
 0.920
EDD76_11845
Unannotated protein.
    
 0.919
EDD76_11121
Unannotated protein.
  
    0.891
pyrH
Unannotated protein; Catalyzes the reversible phosphorylation of UMP to UDP.
 
  
 0.797
Your Current Organism:
Kineothrix alysoides
NCBI taxonomy Id: 1469948
Other names: ATCC TSD-26, Clostridium sp. KNHs209, DSM 100556, K. alysoides, Kineothrix alysoides Haas and Blanchard 2017, Lachnospiraceae bacterium KNHs209, strain KNHs209
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.