STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDD76_10125Unannotated protein. (3663 aa)    
Predicted Functional Partners:
EDD76_10116
Unannotated protein.
 
  
  0.857
EDD76_10124
Unannotated protein.
       0.773
EDD76_103244
Unannotated protein.
  
 
 0.756
EDD76_10123
Unannotated protein.
       0.741
EDD76_102282
Unannotated protein.
  
 
 0.727
EDD76_10122
Unannotated protein.
       0.662
EDD76_10121
Unannotated protein.
       0.662
EDD76_10120
Unannotated protein.
       0.652
EDD76_10119
Unannotated protein.
       0.652
EDD76_10118
Unannotated protein.
       0.652
Your Current Organism:
Kineothrix alysoides
NCBI taxonomy Id: 1469948
Other names: ATCC TSD-26, Clostridium sp. KNHs209, DSM 100556, K. alysoides, Kineothrix alysoides Haas and Blanchard 2017, Lachnospiraceae bacterium KNHs209, strain KNHs209
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.