STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDD76_11052Unannotated protein; Belongs to the LysR transcriptional regulatory family. (311 aa)    
Predicted Functional Partners:
EDD76_11591
Unannotated protein; Belongs to the LysR transcriptional regulatory family.
  
     0.669
EDD76_11050
Unannotated protein.
 
  
 0.582
EDD76_106114
Unannotated protein; Belongs to the LysR transcriptional regulatory family.
  
     0.553
EDD76_1237
Unannotated protein; Belongs to the LysR transcriptional regulatory family.
  
     0.553
EDD76_11885
Unannotated protein; Belongs to the LysR transcriptional regulatory family.
  
     0.525
EDD76_11051
Unannotated protein.
       0.493
EDD76_102188
Unannotated protein; Belongs to the sulfur carrier protein TusA family.
  
  
 0.459
EDD76_11053
Unannotated protein.
     
 0.446
EDD76_11834
Unannotated protein.
 
  
 0.437
EDD76_108132
Unannotated protein.
     
 0.423
Your Current Organism:
Kineothrix alysoides
NCBI taxonomy Id: 1469948
Other names: ATCC TSD-26, Clostridium sp. KNHs209, DSM 100556, K. alysoides, Kineothrix alysoides Haas and Blanchard 2017, Lachnospiraceae bacterium KNHs209, strain KNHs209
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.