STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDD76_110112Unannotated protein. (557 aa)    
Predicted Functional Partners:
EDD76_110111
Unannotated protein.
       0.773
EDD76_11177
Unannotated protein.
    
   0.750
EDD76_110110
Unannotated protein.
 
  
 0.724
EDD76_102349
Unannotated protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
    0.561
EDD76_115114
Unannotated protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
   
    0.543
EDD76_110113
Unannotated protein.
       0.536
EDD76_110107
Unannotated protein; Belongs to the ABC transporter superfamily.
 
  
 0.479
groL
Unannotated protein; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
  
    0.470
EDD76_110109
Unannotated protein.
 
  
 0.464
EDD76_110108
Unannotated protein.
 
    0.462
Your Current Organism:
Kineothrix alysoides
NCBI taxonomy Id: 1469948
Other names: ATCC TSD-26, Clostridium sp. KNHs209, DSM 100556, K. alysoides, Kineothrix alysoides Haas and Blanchard 2017, Lachnospiraceae bacterium KNHs209, strain KNHs209
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