STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDD76_10947Unannotated protein. (387 aa)    
Predicted Functional Partners:
EDD76_10946
Unannotated protein.
     0.906
kduI
Unannotated protein; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
   
 0.873
EDD76_10940
Unannotated protein.
 
     0.793
EDD76_10942
Unannotated protein.
 
   
 0.788
EDD76_116112
Unannotated protein; Belongs to the glycosyl hydrolase 13 family.
    
 0.774
EDD76_10945
Unannotated protein.
  
    0.707
EDD76_10953
Unannotated protein.
 
     0.621
EDD76_10948
Unannotated protein.
       0.613
EDD76_10950
Unannotated protein.
 
     0.579
EDD76_11947
Unannotated protein; Belongs to the glycosyl hydrolase 2 family.
  
  0.571
Your Current Organism:
Kineothrix alysoides
NCBI taxonomy Id: 1469948
Other names: ATCC TSD-26, Clostridium sp. KNHs209, DSM 100556, K. alysoides, Kineothrix alysoides Haas and Blanchard 2017, Lachnospiraceae bacterium KNHs209, strain KNHs209
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.