STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDD76_104104Unannotated protein. (385 aa)    
Predicted Functional Partners:
EDD76_108132
Unannotated protein.
    
 0.956
EDD76_108156
Unannotated protein.
    
 0.956
EDD76_108128
Unannotated protein.
    
 0.854
GCA_000732725_03759
Unannotated protein.
  
 
  0.761
EDD76_104105
Unannotated protein.
       0.751
EDD76_104106
Unannotated protein.
     
 0.727
EDD76_104107
Unannotated protein.
       0.670
EDD76_104103
Unannotated protein.
  
 
  0.662
EDD76_104111
Unannotated protein; Belongs to the DegT/DnrJ/EryC1 family.
   
  0.630
EDD76_108127
Unannotated protein.
    
 0.583
Your Current Organism:
Kineothrix alysoides
NCBI taxonomy Id: 1469948
Other names: ATCC TSD-26, Clostridium sp. KNHs209, DSM 100556, K. alysoides, Kineothrix alysoides Haas and Blanchard 2017, Lachnospiraceae bacterium KNHs209, strain KNHs209
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.