STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDD76_108179Unannotated protein. (608 aa)    
Predicted Functional Partners:
EDD76_108178
Unannotated protein.
 
     0.942
EDD76_108181
Unannotated protein.
 
     0.942
EDD76_108176
Unannotated protein.
 
     0.903
EDD76_108190
Unannotated protein.
 
  
 0.889
EDD76_108180
Unannotated protein.
  
  
 0.887
EDD76_108202
Unannotated protein.
 
  
 0.839
EDD76_108191
Unannotated protein.
 
   
 0.813
EDD76_108207
Unannotated protein.
 
     0.811
EDD76_108211
Unannotated protein.
 
   
 0.809
EDD76_108188
Unannotated protein.
 
     0.805
Your Current Organism:
Kineothrix alysoides
NCBI taxonomy Id: 1469948
Other names: ATCC TSD-26, Clostridium sp. KNHs209, DSM 100556, K. alysoides, Kineothrix alysoides Haas and Blanchard 2017, Lachnospiraceae bacterium KNHs209, strain KNHs209
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.