STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDD76_11593Unannotated protein. (221 aa)    
Predicted Functional Partners:
EDD76_11592
Unannotated protein.
 
    0.982
EDD76_11594
Unannotated protein.
 
     0.918
EDD76_10672
Unannotated protein.
 
    0.803
EDD76_11171
Unannotated protein.
    
   0.648
EDD76_11352
Unannotated protein.
  
  
 0.643
EDD76_102322
Unannotated protein.
  
 
 0.575
EDD76_106212
Unannotated protein.
  
 
 0.575
EDD76_11585
Unannotated protein.
  
 
 0.575
EDD76_12020
Unannotated protein.
  
 
 0.575
EDD76_11591
Unannotated protein; Belongs to the LysR transcriptional regulatory family.
       0.524
Your Current Organism:
Kineothrix alysoides
NCBI taxonomy Id: 1469948
Other names: ATCC TSD-26, Clostridium sp. KNHs209, DSM 100556, K. alysoides, Kineothrix alysoides Haas and Blanchard 2017, Lachnospiraceae bacterium KNHs209, strain KNHs209
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.