STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001262635_00177Unannotated protein. (326 aa)    
Predicted Functional Partners:
GCA_001262635_00176
Unannotated protein.
 
  0.976
GCA_001262635_00173
Unannotated protein.
 
     0.911
GCA_001262635_00174
Unannotated protein.
 
  
  0.901
GCA_001262635_00175
Unannotated protein.
 
     0.895
GCA_001262635_00172
Unannotated protein.
 
     0.835
GCA_001262635_00178
Unannotated protein.
 
   
 0.824
GCA_001262635_00170
Unannotated protein.
 
 
   0.815
GCA_001262635_00179
Unannotated protein.
 
   
 0.806
GCA_001262635_03136
Unannotated protein.
     
 0.788
GCA_001262635_03137
Unannotated protein.
     
 0.784
Your Current Organism:
Aestuariivita boseongensis
NCBI taxonomy Id: 1470562
Other names: A. boseongensis, Aestuariivita boseongensis Park et al. 2014, CECT 8532, KCTC 42052, Rhodobacteraceae bacterium BS-B2, strain BS-B2
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