STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001262635_01980Unannotated protein. (878 aa)    
Predicted Functional Partners:
GCA_001262635_03121
Unannotated protein.
    
  0.842
GCA_001262635_00440
Unannotated protein.
  
 0.824
GCA_001262635_00559
Unannotated protein.
  
 0.824
GCA_001262635_00451
Unannotated protein.
   
 0.793
GCA_001262635_02788
Unannotated protein.
   
 0.793
GCA_001262635_03135
Unannotated protein.
   
 0.764
GCA_001262635_03138
Unannotated protein.
   
  0.751
GCA_001262635_03137
Unannotated protein.
   
 
 0.744
GCA_001262635_00971
Unannotated protein.
 
 
  0.743
GCA_001262635_03646
Unannotated protein.
   
 0.742
Your Current Organism:
Aestuariivita boseongensis
NCBI taxonomy Id: 1470562
Other names: A. boseongensis, Aestuariivita boseongensis Park et al. 2014, CECT 8532, KCTC 42052, Rhodobacteraceae bacterium BS-B2, strain BS-B2
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