STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001262635_03040Unannotated protein. (538 aa)    
Predicted Functional Partners:
GCA_001262635_03041
Unannotated protein.
 
     0.867
GCA_001262635_03039
Unannotated protein.
       0.705
GCA_001262635_03038
Unannotated protein.
       0.633
GCA_001262635_03037
Unannotated protein.
     
 0.553
GCA_001262635_03803
Unannotated protein.
  
   
 0.521
GCA_001262635_00422
Unannotated protein.
  
     0.499
GCA_001262635_03805
Unannotated protein.
 
   
 0.432
GCA_001262635_02193
Unannotated protein.
 
   
 0.409
Your Current Organism:
Aestuariivita boseongensis
NCBI taxonomy Id: 1470562
Other names: A. boseongensis, Aestuariivita boseongensis Park et al. 2014, CECT 8532, KCTC 42052, Rhodobacteraceae bacterium BS-B2, strain BS-B2
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