STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ11234.1NADPH:quinone reductase. (349 aa)    
Predicted Functional Partners:
SHK16838.1
MaoC like domain-containing protein.
  
 0.722
SHK53051.1
Oxaloacetate decarboxylase, alpha subunit.
    
 0.652
SHJ11268.1
Transcriptional regulator, IclR family.
    
  0.589
SHK24555.1
Zinc-binding alcohol dehydrogenase family protein; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.
 
  
  0.580
SHJ14442.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
 0.560
SHK55584.1
Phosphate acetyltransferase/phosphate butyryltransferase.
  
 0.528
SHJ55425.1
oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase.
  
 0.527
SHI79692.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.498
SHJ30437.1
3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.498
SHJ55610.1
Short chain enoyl-CoA hydratase.
  
 0.498
Your Current Organism:
Pseudopelagicola gijangensis
NCBI taxonomy Id: 1470563
Other names: CECT 8540, DSM 100564, KCTC 42049, P. gijangensis, Pseudopelagicola gijangensis Kim et al. 2014, Rhodobacteraceae bacterium YSS-7, strain YSS-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.