STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ97813.1Protein-disulfide isomerase. (223 aa)    
Predicted Functional Partners:
SHJ97847.1
Hypothetical protein.
 
     0.857
SHJ22560.1
Disulfide bond formation protein DsbB.
  
 
 0.742
SHJ91910.1
Protein-disulfide isomerase.
  
   
 0.716
SHJ97883.1
A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs.
       0.686
SHJ30104.1
Cu+-exporting ATPase.
 
 
 
 0.487
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.484
SHJ97911.1
Alkane 1-monooxygenase.
       0.473
SHJ66772.1
Ribonuclease J.
  
     0.468
SHJ63047.1
Cell division protein FtsW; Belongs to the SEDS family.
  
    0.458
SHI97045.1
Thiol-disulfide isomerase or thioredoxin.
 
 
 0.442
Your Current Organism:
Pseudopelagicola gijangensis
NCBI taxonomy Id: 1470563
Other names: CECT 8540, DSM 100564, KCTC 42049, P. gijangensis, Pseudopelagicola gijangensis Kim et al. 2014, Rhodobacteraceae bacterium YSS-7, strain YSS-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.