STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK03701.1NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. (201 aa)    
Predicted Functional Partners:
SHK03660.1
Virginiamycin A acetyltransferase.
       0.774
SHK03625.1
Glutathione S-transferase.
       0.773
SHK03741.1
Predicted N-acetyltransferase YhbS.
       0.697
SHK03783.1
EcsC protein family protein.
       0.640
SHJ42714.1
cob(II)yrinic acid a,c-diamide reductase.
  
 
 0.637
SHJ15054.1
Dihydroorotate oxidase B, catalytic subunit.
  
 
  0.614
mtnP
Methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily.
    
  0.505
SHK35744.1
Serine/threonine protein phosphatase 1.
 
  
  0.451
SHK16375.1
Nitroreductase.
  
 
 0.447
SHI41977.1
Chromate reductase.
    
 0.429
Your Current Organism:
Pseudopelagicola gijangensis
NCBI taxonomy Id: 1470563
Other names: CECT 8540, DSM 100564, KCTC 42049, P. gijangensis, Pseudopelagicola gijangensis Kim et al. 2014, Rhodobacteraceae bacterium YSS-7, strain YSS-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.