STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK51261.1Hypothetical protein. (277 aa)    
Predicted Functional Partners:
SHI67002.1
Putative peptidoglycan binding domain-containing protein.
  
     0.768
SHJ66356.1
Hypothetical protein.
  
     0.766
SHJ66954.1
Hint domain-containing protein.
  
     0.755
SHJ84513.1
Hypothetical protein.
  
     0.746
SHI62268.1
Hint domain-containing protein.
  
     0.725
SHJ68218.1
Hypothetical protein.
  
     0.723
SHJ98188.1
Hypothetical protein.
  
     0.714
SHJ04342.1
Sporulation related domain-containing protein.
  
     0.708
SHK06845.1
Hypothetical protein.
  
     0.708
SHK19921.1
Core-2/I-Branching enzyme.
  
     0.705
Your Current Organism:
Pseudopelagicola gijangensis
NCBI taxonomy Id: 1470563
Other names: CECT 8540, DSM 100564, KCTC 42049, P. gijangensis, Pseudopelagicola gijangensis Kim et al. 2014, Rhodobacteraceae bacterium YSS-7, strain YSS-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.