STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSQ41989.1Dihydrolipoamide dehydrogenase; Bacteria available from MCCC 1A01428. Source DNA available from MCCC 1A01428; Derived by automated computational analysis using gene prediction method: Protein Homology. (475 aa)    
Predicted Functional Partners:
OSQ41532.1
Pyruvate dehydrogenase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
 
 0.999
OSQ42005.1
Membrane protein; Bacteria available from MCCC 1A01428. Source DNA available from MCCC 1A01428; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.996
OSQ44991.1
Dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
 0.980
OSQ41571.1
Branched-chain alpha-keto acid dehydrogenase subunit E2; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
 0.979
sucA
2-oxoglutarate dehydrogenase; Bacteria available from MCCC 1A01428. Source DNA available from MCCC 1A01428; SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.976
OSQ43114.1
Dihydrolipoamide dehydrogenase; Bacteria available from MCCC 1A01428. Source DNA available from MCCC 1A01428; E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.958
OSQ43116.1
Pyruvate dehydrogenase; Bacteria available from MCCC 1A01428. Source DNA available from MCCC 1A01428; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.958
OSQ43694.1
Pyruvate dehydrogenase; Bacteria available from MCCC 1A01428. Source DNA available from MCCC 1A01428; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.955
OSQ43117.1
ABC transporter substrate-binding protein; Bacteria available from MCCC 1A01428. Source DNA available from MCCC 1A01428; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.930
pdhA
Pyruvate dehydrogenase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
 
 
 0.930
Your Current Organism:
Thalassospira sp. MCCC1A01428
NCBI taxonomy Id: 1470575
Other names: T. sp. MCCC 1A01428, Thalassospira sp. MCCC 1A01428
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