STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSQ41237.1Spermidine/putrescine ABC transporter permease; Bacteria available from MCCC 1A01428. Source DNA available from MCCC 1A01428; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)    
Predicted Functional Partners:
OSQ41238.1
Spermidine/putrescine ABC transporter ATP-binding protein; Bacteria available from MCCC 1A01428. Source DNA available from MCCC 1A01428; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 
 0.992
OSQ41239.1
Spermidine/putrescine ABC transporter substrate-binding protein; Bacteria available from MCCC 1A01428. Source DNA available from MCCC 1A01428; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.990
OSQ41236.1
ABC transporter permease; Bacteria available from MCCC 1A01428. Source DNA available from MCCC 1A01428; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.988
OSQ42195.1
Spermidine/putrescine ABC transporter permease; Bacteria available from MCCC 1A01428. Source DNA available from MCCC 1A01428; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.958
OSQ44804.1
ABC transporter permease; Bacteria available from MCCC 1A01428. Source DNA available from MCCC 1A01428; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.932
OSQ45478.1
ABC transporter permease; Bacteria available from MCCC 1A01428. Source DNA available from MCCC 1A01428; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.924
OSQ43411.1
Spermidine/putrescine ABC transporter permease; Bacteria available from MCCC 1A01428. Source DNA available from MCCC 1A01428; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.920
OSQ44805.1
Spermidine/putrescine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 
 0.888
fbpC
Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.
 0.880
OSQ43406.1
Spermidine/putrescine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 
 0.876
Your Current Organism:
Thalassospira sp. MCCC1A01428
NCBI taxonomy Id: 1470575
Other names: T. sp. MCCC 1A01428, Thalassospira sp. MCCC 1A01428
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