STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSQ37618.1MarR family transcriptional regulator; Bacteria available from MCCC 1A01428. Source DNA available from MCCC 1A01428; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa)    
Predicted Functional Partners:
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
  
 
  0.643
OSQ42512.1
Hypothetical protein; Bacteria available from MCCC 1A01428. Source DNA available from MCCC 1A01428; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.607
OSQ36915.1
Histidine kinase; Bacteria available from MCCC 1A01428. Source DNA available from MCCC 1A01428; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.578
pgi
Glucose-6-phosphate isomerase; Bacteria available from MCCC 1A01428. Source DNA available from MCCC 1A01428; functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GPI family.
    
 0.574
OSQ45360.1
Histidine kinase; Bacteria available from MCCC 1A01428. Source DNA available from MCCC 1A01428; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.570
OSQ41333.1
Hypothetical protein; Bacteria available from MCCC 1A01428. Source DNA available from MCCC 1A01428; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.556
OSQ41561.1
Threonine dehydratase; Bacteria available from MCCC 1A01428. Source DNA available from MCCC 1A01428; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.541
OSQ43934.1
Response regulator; Bacteria available from MCCC 1A01428. Source DNA available from MCCC 1A01428; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.513
OSQ41890.1
Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
    
  0.503
OSQ45866.1
Hypothetical protein; Bacteria available from MCCC 1A01428. Source DNA available from MCCC 1A01428; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.497
Your Current Organism:
Thalassospira sp. MCCC1A01428
NCBI taxonomy Id: 1470575
Other names: T. sp. MCCC 1A01428, Thalassospira sp. MCCC 1A01428
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