STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BW41_00284Phage Terminase family protein. (584 aa)    
Predicted Functional Partners:
BW41_00283
Phage portal protein, HK97.
 
   
 0.954
BW41_00281
Phage major capsid protein, HK97 precursor.
 
     0.924
BW41_00282
Putative prohead protease.
 
     0.900
BW41_00286
HNH endonuclease family protein.
 
  
 0.894
BW41_00279
Hypothetical protein.
 
     0.837
BW41_00285
Hypothetical protein.
     
 0.804
BW41_00089
HNH endonuclease family protein.
 
  
 0.783
BW41_02488
HNH endonuclease family protein.
 
  
 0.774
BW41_00092
Phage portal protein, HK97 family.
 
   
 0.761
BW41_02857
Phage major capsid protein, HK97 family.
 
     0.659
Your Current Organism:
Sphingomonas sp. RIT328
NCBI taxonomy Id: 1470591
Other names: S. sp. RIT328
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.