STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BW41_01329Rrf2 family protein. (143 aa)    
Predicted Functional Partners:
BW41_00600
Hypothetical protein.
  
 
 0.959
BW41_03900
Cysteine desulfurase; Overlaps another CDS with the same product name.
  
 
 0.922
BW41_03901
Cysteine desulfurase; Overlaps another CDS with the same product name.
  
 
 0.922
BW41_02374
Iron-sulfur cluster assembly accessory family protein; Belongs to the HesB/IscA family.
 
  
 0.842
fliG_1
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
    
   0.649
fliG_2
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
    
   0.649
BW41_02386
Nitrogen-fixing NifU-like protein.
 
 
 0.538
BW41_02551
ThiF family protein.
    
  0.421
Your Current Organism:
Sphingomonas sp. RIT328
NCBI taxonomy Id: 1470591
Other names: S. sp. RIT328
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.