STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BW41_03785Multidrug resistance protein B. (465 aa)    
Predicted Functional Partners:
BW41_02690
HlyD secretion family protein.
 
 0.758
BW41_00877
Secretion protein HlyD family protein.
 
 0.731
BW41_03455
HlyD secretion family protein.
 
 0.730
BW41_03794
Drug resistance MFS transporter, drug:H+ antiporter-1 family protein; Belongs to the major facilitator superfamily.
  
     0.718
BW41_03793
HlyD secretion family protein.
 
 0.717
BW41_02678
HlyD secretion family protein.
 
 0.667
BW41_03784
Hypothetical protein; Prolyl oligopeptidase, N-terminal beta-propeller domain protein.
       0.638
BW41_00330
Putative HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.610
BW41_01681
Major facilitator superfamily MFS_1.
  
  
  0.406
Your Current Organism:
Sphingomonas sp. RIT328
NCBI taxonomy Id: 1470591
Other names: S. sp. RIT328
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.