STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001039575_00289Unannotated protein. (164 aa)    
Predicted Functional Partners:
GCA_001039575_01193
Unannotated protein.
   
 0.944
GCA_001039575_00695
Unannotated protein.
  
 0.938
GCA_001039575_01764
Unannotated protein.
     
 0.928
GCA_001039575_01507
Unannotated protein.
    
 0.925
GCA_001039575_02465
Unannotated protein.
  
 0.915
GCA_001039575_01206
Unannotated protein.
    
 0.857
GCA_001039575_02419
Unannotated protein.
    
 0.832
GCA_001039575_02420
Unannotated protein.
    
 0.832
GCA_001039575_03391
Unannotated protein.
  
 
 0.792
GCA_001039575_01103
Unannotated protein.
   
 0.773
Your Current Organism:
Halomonas sp. PRM31
NCBI taxonomy Id: 1471202
Other names: H. sp. PR-M31, Halomonas sp. PR-M31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.