STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001039575_02014Unannotated protein. (99 aa)    
Predicted Functional Partners:
GCA_001039575_02015
Unannotated protein.
 
    0.955
GCA_001039575_00598
Unannotated protein.
 
    0.811
GCA_001039575_03158
Unannotated protein.
 
    0.806
GCA_001039575_02376
Unannotated protein.
 
    0.581
GCA_001039575_02012
Unannotated protein.
       0.450
GCA_001039575_02013
Unannotated protein.
       0.450
Your Current Organism:
Halomonas sp. PRM31
NCBI taxonomy Id: 1471202
Other names: H. sp. PR-M31, Halomonas sp. PR-M31
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.