STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQS55679.1Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology. (549 aa)    
Predicted Functional Partners:
AQS55652.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.807
AQS56994.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.786
AQS55631.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
 0.781
AQS57020.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
 0.781
AQS55677.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.762
AQS55678.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.762
AQS55673.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.656
AQS55622.1
DNA topoisomerase III; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.613
AQS55638.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.613
AQS55680.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.612
Your Current Organism:
Novibacillus thermophilus
NCBI taxonomy Id: 1471761
Other names: Bacillales bacterium SG-1, Bacillales bacterium SG-2, CGMCC 1.12771, KCTC 33118, N. thermophilus, Novibacillus thermophilus Yang et al. 2015, strain SG-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.