STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQS56406.16-phosphogluconate dehydrogenase (decarboxylating); Derived by automated computational analysis using gene prediction method: Protein Homology. (299 aa)    
Predicted Functional Partners:
AQS57537.1
Gluconokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FGGY kinase family.
 
 
 0.984
B0W44_03720
Transcriptional repressor CodY; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.915
AQS56130.1
Ribose 5-phosphate isomerase B; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.912
AQS57200.1
Ribose 5-phosphate isomerase B; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.912
AQS55561.1
Ribulose-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribulose-phosphate 3-epimerase family.
    
 0.909
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
    
 0.818
araB
Ribulokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.800
AQS54817.1
Altronate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.800
AQS56126.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.800
B0W44_12185
6-phospho-beta-glucosidase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.622
Your Current Organism:
Novibacillus thermophilus
NCBI taxonomy Id: 1471761
Other names: Bacillales bacterium SG-1, Bacillales bacterium SG-2, CGMCC 1.12771, KCTC 33118, N. thermophilus, Novibacillus thermophilus Yang et al. 2015, strain SG-1
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