STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OME85615.1SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)    
Predicted Functional Partners:
OME85961.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.905
OME85946.1
Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.817
OME85616.1
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.786
OME85909.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.744
OME81662.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.744
OME81127.1
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.744
OME80330.1
3' terminal RNA ribose 2'-O-methyltransferase Hen1; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.744
OME79414.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.744
BK122_27355
UDP-N-acetyl-D-glucosamine dehydrogenase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.744
OME81611.1
FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.722
Your Current Organism:
Paenibacillus pabuli
NCBI taxonomy Id: 1472
Other names: ATCC 43899, Bacillus pabuli, CCUG 27415, CFBP 4262, CIP 103119, DSM 3036, IFO 13638, JCM 9074, LMG 15970, LMG:15970, NBRC 13638, NRRL NRS-924, P. pabuli, Paenibacillus pubuli
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.