Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OME85687.1DNA starvation/stationary phase protection protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family. (159 aa)    
Predicted Functional Partners:
OME80972.1
Protein prkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.676
OME81045.1
Thioredoxin peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.591
hpf
Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
   
    0.583
OME83720.1
NAD(P)H:quinone oxidoreductase, type IV; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.539
OME81612.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.539
OME85688.1
Nitric oxide synthase oxygenase; Catalyzes the production of nitric oxide. Belongs to the NOS family. Bacterial NOS oxygenase subfamily.
       0.503
OME78508.1
Anti-sigma B factor RsbW; Binds to sigma-B preventing the formation of an RNA polymerase holoenzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.494
OME77501.1
Universal stress protein UspA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.490
OME79869.1
Copper resistance protein CopZ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.448
OME81743.1
Flagellar motor switch phosphatase FliY; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.438
Your Current Organism:
Paenibacillus pabuli
NCBI taxonomy Id: 1472
Other names: ATCC 43899, Bacillus pabuli, CCUG 27415, CFBP 4262, CIP 103119, DSM 3036, IFO 13638, JCM 9074, LMG 15970, LMG:15970, NBRC 13638, NRRL NRS-924, P. pabuli, Paenibacillus pubuli
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