Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OME82349.1 | OME82350.1 | BK122_10275 | BK122_10280 | Xylanase deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.744 |
OME82349.1 | OME82351.1 | BK122_10275 | BK122_10285 | Xylanase deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Adaptor protein; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis; Belongs to the MecA family. | 0.667 |
OME82349.1 | OME82352.1 | BK122_10275 | BK122_10290 | Xylanase deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Protease PrsW; Involved in the degradation of specific anti-sigma factors. Belongs to the protease PrsW family. | 0.430 |
OME82350.1 | OME82349.1 | BK122_10280 | BK122_10275 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Xylanase deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.744 |
OME82350.1 | OME82351.1 | BK122_10280 | BK122_10285 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Adaptor protein; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis; Belongs to the MecA family. | 0.706 |
OME82350.1 | OME82352.1 | BK122_10280 | BK122_10290 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Protease PrsW; Involved in the degradation of specific anti-sigma factors. Belongs to the protease PrsW family. | 0.518 |
OME82351.1 | OME82349.1 | BK122_10285 | BK122_10275 | Adaptor protein; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis; Belongs to the MecA family. | Xylanase deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.667 |
OME82351.1 | OME82350.1 | BK122_10285 | BK122_10280 | Adaptor protein; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis; Belongs to the MecA family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.706 |
OME82351.1 | OME82352.1 | BK122_10285 | BK122_10290 | Adaptor protein; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis; Belongs to the MecA family. | Protease PrsW; Involved in the degradation of specific anti-sigma factors. Belongs to the protease PrsW family. | 0.777 |
OME82352.1 | OME82349.1 | BK122_10290 | BK122_10275 | Protease PrsW; Involved in the degradation of specific anti-sigma factors. Belongs to the protease PrsW family. | Xylanase deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.430 |
OME82352.1 | OME82350.1 | BK122_10290 | BK122_10280 | Protease PrsW; Involved in the degradation of specific anti-sigma factors. Belongs to the protease PrsW family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.518 |
OME82352.1 | OME82351.1 | BK122_10290 | BK122_10285 | Protease PrsW; Involved in the degradation of specific anti-sigma factors. Belongs to the protease PrsW family. | Adaptor protein; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis; Belongs to the MecA family. | 0.777 |