node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OME76249.1 | OME81037.1 | BK122_29930 | BK122_16425 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.814 |
OME76249.1 | OME81777.1 | BK122_29930 | BK122_14010 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L7ae; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.992 |
OME76249.1 | OME81850.1 | BK122_29930 | BK122_14395 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent helicase HrpB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.830 |
OME76249.1 | glnS | BK122_29930 | BK122_02525 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | glutamine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.980 |
OME76249.1 | rplA | BK122_29930 | BK122_29755 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.996 |
OME76249.1 | rplB | BK122_29930 | BK122_29830 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.997 |
OME76249.1 | rplE | BK122_29930 | BK122_29875 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.999 |
OME76249.1 | rpsL | BK122_29930 | BK122_29790 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.996 |
OME76249.1 | rpsN | BK122_29930 | BK122_29880 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.995 |
OME76249.1 | rpsN-2 | BK122_29930 | BK122_21740 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.994 |
OME81037.1 | OME76249.1 | BK122_16425 | BK122_29930 | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.814 |
OME81037.1 | OME81777.1 | BK122_16425 | BK122_14010 | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L7ae; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.801 |
OME81037.1 | OME81850.1 | BK122_16425 | BK122_14395 | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent helicase HrpB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.815 |
OME81037.1 | glnS | BK122_16425 | BK122_02525 | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | glutamine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.801 |
OME81037.1 | rplA | BK122_16425 | BK122_29755 | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.920 |
OME81037.1 | rplB | BK122_16425 | BK122_29830 | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.929 |
OME81037.1 | rplE | BK122_16425 | BK122_29875 | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.930 |
OME81037.1 | rpsL | BK122_16425 | BK122_29790 | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.930 |
OME81037.1 | rpsN | BK122_16425 | BK122_29880 | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.893 |
OME81037.1 | rpsN-2 | BK122_16425 | BK122_21740 | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.893 |